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  • Review
    LAN Mengjiao,KOU Meng,XIAO Manqiu,LI Chen,PAN Hao,ZHANG Yungang,LU Lingzhi,HOU Longying,GE Ruihua,WU Wensheng,LI Qiang
    AP2/ERF(APETALA2/ethylene responsive factor) is one of the largest transcription factor (TF) families in plants, which contains at least one specific AP2 domains composed of 60-70 highly conserved amino acids. Depending on the number and sequence similarity of AP2 domains, this family can be classified into five subfamilies: AP2 (APETALA2), DREB (dehydration-responsive element binding proteins), ERF (ethylene-responsive factor), RAV (related to AB13/VP), and Soloist. AP2/ERF TFs regulate their expression by binding to target genes through YRG and RAYD conserved elements in the AP2 domain. At present,AP2/ERF TFs have become a hot candidate gene for studying plant stress resistance mechanisms and biosynthesis of active ingredients. More and more AP2/ERF families and their members have been reported. In this review, we summarized the latest research achievements on plant AP2/ERF family, including the structural characteristics and classification, and the research progress of AP2/ERF TFs involved in regulation of plant secondary metabolites synthesis, participation in biological and abiotic stress response was mainly introduced.Meanwhile, possible hot research topics and fields of AP2/ERF were proposed,which may provide a reference for further mining and utilization of such transcription factor genes for plant genetic improvement and germplasm innovation.
  • Review
    OUYANG Suying,WANG Zhiquan,LI Qing,XU Qing,HE Huan,ZHANG Hongguan,ZOU Xuexiao,HU Bowen
    Chili(Capsicum annuum L.)crops have high economic value and extensive planting, and most of the chili cultivars in China have high plant type, many branches, easy lodging, not conducive to mechanized production, and the cost of artificial production is rising. With the improvement of agricultural production technology and the increasing shortage of labor, the transformation of traditional agriculture to modern mechanized agriculture is imminent. The proposal of ideal plant type makes plant type regulation a hot spot in genetic breeding, which can provide reference for the analysis of the regulation mechanism of chili plant type. This paper reviews the research results of recent domestic and foreign scholars on the genetic factors and molecular mechanisms of plant type regulation, the biological relationship between plant hormones and plant type, and the influence of the environment on plant type, and puts forward the idea of ideal plant type of chili. Good chili plant type can improve plant production capacity, facilitate management, alleviate labor shortage, and accelerate the process of mechanized production. At present, there are few research reports on the regulation mechanism of chili plant type, so exploring the breeding mechanism and genetic basis of plant type regulation is conducive to providing theoretical support for the creation of good plant type germplasm resources and accelerating the selection and breeding of new varieties, and laying the foundation for the genetic breeding .
  • Review
    CHI Xiaona,ZHANG Huanhuan,GU Wenyuan,ZHANG Xingmin,WANG Yuping
    As one of the important mechanisms of epigenetic regulation, usually occurs in plant cytosine bases, including CG, CHG and CHH. DNA methylation mainly affects chromatin structure and gene transcription level. DNA methylation plays important roles in transcriptional regulation and maintaining the genome stability. Abiotic stresses affect plant growth and reproduction and ultimately lead to plant death. Based on existing research findings, DNA methylation can induce phenotypic alterations in plants under stress.To cope with abiotic stresses, the change mechanism of DNA methylation level during growth is affected by methylase and demethylase. The signal transduction pathways can change the expression of some stress response genes, thus causing changes in plant morphology, physiology and biochemistry to adapt to adversity. Some genes are upregulated (initiate) or downregulated (close down) in expression in order to assure the adaptive growth and development of plant, thus enabling plants to adapt and resist stress damage to a certain extent. This article reviews the DNA methylation modification and its role in transcriptional regulation, research progress in the growth and development of horticultural plants, and the epigenetic regulation of abiotic stress as well as the problems and prospective of horticultural plants. It provides a reference for the genetic improvement of horticultural plants and deciphering the mechanism of stress resistance.
  • Review
    FAN Wenguang,CHAI Jiajing,LI Baoyu,TIAN Yaqin,TIAN Hui,REN Haiwei,BAI Peng,PAN Xiangyi
    Lily is a perennial bulbous herb. Lily is one of the most important ornamental crops in the world because of its dignified posture and colorful flowers. The underground part fleshy bulbs of the edible lily can be eaten,and some species can also be used as medicine or extract spices,therefore,lily is a plant resource with high development and utilization value. The differences of the types and contents of anthocyanins and their distribution in different areas in petals result in the color diversity of the ornamental lily and the violet red change of the edible lily bulbs at the late storage stage are mainly caused by anthocyanin accumulation. Anthocyanin is widely distributed and an important natural pigment in plants,and its biosynthesis is mainly co-regulated by structural and regulatory genes that interact with environmental factors. Anthocyanin accumulation after biosynthesis is regulated by transporter. The variety of flower color is beneficial to improve the ornamental value,while the violet red change might decrease the quality and commodity value of the edible lily bulbs. Therefore,this study reviews and summarizes the structure,biosynthetic pathway,transcriptional regulation and transport of anthocyanins of the ornamental lily flowers and edible lily bulbs,and the exploration fields and trends were conceived,in order to provide a reference for deciphering the molecular regulatory mechanism of lily anthocyanin glycosides,as well as improving its content and accumulation site.
  • Review
    WEN Yingjie,OU Liangxi,SHI Fachao,YAN Qian,CAI Changhe,JIANG Yonghua,LIU Hailun,CHEN Jiezhen
    Litchi, a subtropical evergreen woody fruit tree that originates in China and has been cultivated for over two thousand years, is essential to China’s fruit tree industry. The rich litchi germplasm resources hosted in China provide an important guarantee for litchi breeding and industrial development. The national litchi and banana germplasm repository (Guangzhou) serves as the primary unit for the preservation of litchi germplasm resources in China and is currently the most comprehensive and standardized litchi germplasm repository in the world. As of December 2022, the national litchi and banana germplasm repository (Guangzhou) has collected and preserved 652 litchi germplasm resources and successfully bred multiple high-quality litchi new varieties, including Hong xiu qiu, Xian jin feng, and Feng shan hong deng long. The repository has also established a population of over 500,000 natural hybrid offspring and more than 20,000 artificially hybrid offspring, promoting basic research on litchi genomics and origins, molecular markers, quality, and disease resistance. These measures have contributed to the adjustment of the litchi varieties and the promotion of the industry, playing an important role in rural poverty alleviation and the sustainable development of the litchi industry. This review presents an overview of the development history of the national litchi and banana germplasm repository (Guangzhou) and also summarizes the progress made in the past two decades regarding litchi germplasm resource collection and preservation, as well as their innovative utilization. Furthermore, we propose future research directions and focus in the national litchi and banana germplasm repository (Guangzhou), aiming to provide a reference for the effective utilization and industrial development of China's litchi germplasm resources.
  • Research Articles
    LI Ying,LIU Haicui,SHI Xiaoxu,SHI Lyu,HAN Xiao,LIU Jian,WEI Yafeng
    In order to improve the utilization efficiency of naked barley germplasm resources in China, 398 accessions of naked barley from different regions were used to analyze the phenotypic diversity at 18 traits, followed by the analysis of coefficient of variation analysis, diversity index analysis, correlation analysis, principal component analysis and cluster analysis. The results revealed abundant variations among phenotypic traits in different resources. The diversity index of the nine quality traits was 0.66 to 2.06, with an average value of 1.42, and the highest value in plant height, kernels per spike and the smallest value in kernel rows. The traits had 4.71% (kernel color) to 61.03% (heading date) of the coefficient of variation, with an average value of 26.59%. The correlation analysis of nine quantitative traits indicated that spikes per plant, spike length, kernels per spike, thousand kernels weight and setting rate could be deployed as the main target traits for high yield naked barley varieties breeding in the future. The results of principal component analysis showed that the cumulative contribution rate of the five principal component factors was 64.297%. Among them, heading date, plant height, row type and thousand kernels weight were the main factors contributing to the phenotypic differences of naked barley. Combined with the membership function analysis, the comprehensive scores (F value) were calculated. Jiangsuyuanmai No. 33, VII-131, Yumimai, Jiangsu yuan mai No. 58, Jianhutuanliulengzi, Daimaoyuanmai, Jiangsuyuanmai No. 65, Jiangsuyuanmai No. 23, Jiangsuyuanmai No. 20 and Jiangsuyuanmai No. 22 had the highest scores. These materials were divided into four groups by systematic clustering analysis and the clustering results were not strongly correlated with geographic location. These results could provide an important reference for the utilization of naked barley accessions and variety breeding.
  • Research Articles
    CHANG Lifang,QIAO Yanwei,CHEN Fang,QIAO Linyi,GUO Huijuan,LI Xin,ZHANG Shuwei,CHANG Zhijian,ZHANG Xiaojun
    Drought is one of the most prominent factors that negatively affect the yield quantity and stability of wheat production. It is of great significance to select elite drought-resistant germplasm resources and cultivate drought-resistant varieties. In this study, the drought resistance of 180 wheat-Thinopyrum intermedium introgression lines was comprehensively evaluated at seed germination stage and adult plant stage. By measuring morphological indicators such as root length, biomass and yield-related traits, combined with principal component analysis, membership function analysis and correlation analysis, drought resistance at two growth stages was evaluated. The results showed that drought stress at two growth stages could result in significant decrease considering the drought-resistant related indicators. Shoot fresh weight, root fresh weight, shoot height and maximum root length decreased significantly at germination stage, and plant height and yield per plant decreased significantly at adult stage. The distributions of drought resistance coefficients of each indicator at different growth stages were significantly different. No significant correlation between the D value of comprehensive drought resistance evaluation at seed germination stage and adult stage was detected, but the D value at adult stage was significantly correlated with the drought resistance coefficients of yield per plant, the maximum root length and shoot dry weight at germination stage. The drought resistance of 180 derived lines was classified using the D value of comprehensive evaluation of drought resistance based on principal component analysis and membership function analysis. As a result, 24 lines at germination stage and 28 lines at adult stage were identified showing extremely drought resistant. Especially, 11 elite lines showing strong drought resistance at both germination and adult stages were obtained, which can be used as excellent germplasm resources for wheat drought-resistant breeding and genetic research.
  • Research Articles
    DU Huaidong,LIU Xiaogang,LIU Yang,WANG Jiyuan,SONG Jiawei,SUN Zhiyong,MA Wei,CHEN Siyi,YANG Xiaoli,TIAN Lei,LI Peifu
    The yield and seed mineral nutrient quality are essential factors in breeding of rice varieties. Identification of rice germplasm resources with high yield and high quality can provide elite parents or intermediate lines in breeding. This study measured eight yield-related traits (plant height, spike length, grain number per panicle, filled grain number per panicle, thousand kernels weight, grain weight per panicle, seed setting rate and grain density) and six mineral nutrient quality-related traits (zinc, iron, calcium, magnesium, copper and manganese content) in 139 japonica rice germplasm accessions, followed by the correlation analysis and principal component analysis (PCA). The plant height, spike length, grain number per panicle, filled grain number per panicle and grain weight per panicle were positively correlated (highly significant), and the content of mineral nutrient was positively correlated with each other in different degrees. The content of Zn and Mg was significantly and negatively correlated with grain weight per panicle. PCA using either eight or six indicators suggested three principal components (PCs), respectively, with the cumulative contribution rate of 78.432% and 71.697%, respectively. Four yield key indicators and five mineral nutrient quality key indicators were selected based on the loadings of these indicators in CI1-3. Two germplasm accessions with high yield and high content of mineral nutrient, namely, Hungarian No.1 and Mu 10-815, were identified by combining the results of comprehensive evaluation of yield and mineral nutritional quality. The cluster analysis suggested four groups within this collection, including Group-I that contained only two germplasms with very high mineral nutrient content, Group-II that contained 41 germplasms with relatively high Zn content but poor yield traits. Group-III and IV with 69 and 27 germplasms respectively, exhibited superior yield traits. Group-III, however, had relatively low mineral nutrient content, whereas Group-IV had relatively high amounts of Mn and Ca content. Collectively, this study can provide theoretical basis and excellent germplasm for the selection and breeding of new high yield and high quality rice varieties.
  • Review
    SHAO Yujiao,KANG Lei,LI Zaiyun
    Chinese woad (Isatis indigotica Fort., 2n=14; Radix Isatidis) is the traditional Chinese medicinal plant widely used in China, and serves as the germplasm resources in crop genetic improvement. This article reviews the progresses in the genomic structure, bioactive compounds and their biosynthesis, as well as distant hybridization with other crop species. The genome size of Chinese woad is about 300 Mb with the tPCK karyotype and 30,000 protein coding genes, and the high quality reference genome reveals the candidate genes and synthesis pathways for main bioactive compounds, indole alkaloids, phenylpropanoids and terpenoids. Through making crosses (male parent) with Brassica rapa and B. napus, the non-classical hybrids containing few chromosomes and fragments of Chinese woad are produced. The somatic hybrids with radish were found with chromosomes of both parents, while they failed to produce seeds by either selfing or backcrossing. The somatic hybrids with B. rapa ssp. chinensis (L.) P. Hanelt show its duplicated chromosomes but male fertile. The somatic hybrids with B. napus derive the whole set of rapeseed-woad additional lines, after successive backcrossing with B. napus. Several lines, if compared to the woad, showed improved resistance against many viruses. The recombinant mitochondria DNA molecule produced during the somatic fusion causes the new cytoplasmic male sterility, and the fertility restoration is realized by the introgression of the gene(s) from one particular chromosome of woad. Finally, we discuss the future genetic study and their utilization based on their novel additional lines.
  • Research Articles
    HE Zhi,DONG Jinyi,LIU Yongbo
    Wild populations are important germplasm resources, and studying their genetic diversity and variation pattern of local wild and cultivated populations can facilitate their scientific protection and sustainable utilization. This study is based on the natural and cultivated distribution area of Chinese chestnut in Beijing, collecting leaves from a total of 93 germplasm of 5 cultivated populations and 1 wild population, and collecting leaves from a total of 16 germplasm of 1 population (as an outgroup) in Yichang (YC), Hubei. Sixteen pairs of microsatellite primers (SSR) were used to analyze the genetic diversity and genetic structure. The wild C. mollissima populations in Beijing was found with relatively high genetic diversity, and the genetic diversity of the wild Hongluosi population (HLS) was significantly higher than that of other populations. There was significant genetic differentiation between populations of C. mollissimaFst = 0.232), with low frequency of gene flow (Nm = 0.547). AMOVA analysis showed that the intra-population genetic variation (57.70 %) was greater than that among populations (42.30%). The genetic structure analysis showed that YC chestnut population was significantly different from Beijing chestnut populations. The HLS wild population was independent of Banliyuan population (BLY, an ancient tree population) and the other cultivated populations that were clustered into a group, indicating that cultivated chestnuts might come from the ancient tree population in Beijing. A coincidence was observed as well based on the UPGMA clustering, PCoA and PCA analysis. Treemix analysis showed that the chestnut populations in Beijing were likely from the YC population in southern China, indicating an evolutionary path for chestnut to migrate from central China to Beijing. The population history results indicate that the Beijing populations differentiated from the YC populations approximately 83,000 years ago, while the differentiation of local wild and cultivated species in Beijing occurred approximately 32,000 years ago. Our results support the hypothesis of chestnut migrating northward from central China. The domestication of cultivated species reduced the genetic diversity of chestnut germplasm resources in Beijing. The wild populations and cultivated ancient trees retain high genetic diversity, which should be protected preferentially.
  • Research Articles
    LI Guangsheng,LU Xiang,LIU Yang,ZHANG Kaixuan,WANG Haihua,TANG Xinke,ZHOU Meiliang
    In order to understand the molecular mechanism of tartary buckwheat against bacterial blight, we isolated the transcription factor gene FtEIN3 in Chuanqiao 1, a representative variety of tartary buckwheat.The FtEIN3 contains the CDS sequence length of 1623 bp, encoding 540 amino acids. The secondary structure of FtEIN3 protein was composed of α-helix (33.52%), extended chain (6.67%), β-fold (2.41%) and irregular coil (57.41%). Phylogenetic tree indicated that FtEIN3 protein was closely related to GhEIN3 and DzEIN3 protein. Five different EIN3 sequence haplotypes were detected in 108 tartary buckwheat germplasm, and out of them Hap3 was an elite haplotype. qRT-PCR revealed that the expression of FtEIN3 gene in tartary buckwheat was induced by Rhizoctonia solani. The FtEIN3 gene in tartary buckwheat was localized in the nucleus under confocal laser microscopy. To further verify the function of FtEIN3 gene, FtEIN3 transgenic Arabidopsis thaliana were constructed and their resistance to blip disease was analyzed. The results showed that overexpression of FtEIN3 gene significantly improved the resistance of transgenic Arabidopsis thaliana to bacterial blight compared with the wild type. These results proved that FtEIN3 gene was involved in the defense process of tartary buckwheat against bacterial blight, and laid a foundation for further research on the molecular mechanism of FtEIN3 regulation of tartary buckwheat resistance toblight.
  • Research Articles
    LI Qinghua,ZHU Yebao,ZHENG Changlin,CHEN Wenjie,JIANG Chuan,WANG Jinying
    This study reported the evaluation of the grain quality traits of rice landraces that were collected from "The Third National Action on Crop Germplasm Resources Survey and Collection" in 2017-2021. Out of 165 white and red grain samples, the highest variation coefficient was observed on the chalkiness of sticky rice, of which the coefficient of indica white grain was as high as 148.91%. The transparency was also detected with high variation coefficient, while the coefficient of brownish was below 5.0%. The variation coefficient of the waxy ratio amongst waxy rice was over 70.0%, the whiteness and the amylose content have lower value of the variation coefficient, while that of the three indexes including brownish, alkali elimination value and gel consistency were below 10.0%. In terms of the grain quality indexes that reaching the standard, the qualified ratio of whole grains or their chalkiness of sticky rice were below 50%, while the qualified ratio of other indexes were above 65.0%. For the glutinous rice, the qualified ratio of whole grains and the amylose content were around 50.0%, and that of the other indexes was higher than 65.0%. The cooking and edible quality is an important aspect in evaluating high-quality rice as well. Among all the varieties of sticky rice and glutinous rice, 60.7% and 35.4%, respectively, of which have reached or above the Grade 3 level issued by the Ministry of Agriculture and Rural Affairs on the three indexes of cooking and edible quality. Compared with the landraces that were collected during the second national survey in Fujian, the amount of landraces with high value of cooking and edible quality has increased significantly within the third survey. Through this study, 10 landraces were identified reaching the high-quality standard issued by the Ministry of Agriculture and Rural Affairs, which provide a material basis for the development of high-quality rice varieties in the future. In addition, 15 germplasms with high amylose content have been identified, which can be used as new raw materials for processing purpose specifically. The mid-colored rice were found with relatively rich amount in local landraces, accounting for about 20.0% of the total, they can provide valuable resources for future breeding and production of rice varieties with special function. In the future, works on the evaluation of grain quality for local landraces should be improved, and excellent germplasm resources would provide a material basis as well as promote the breeding of new superior rice varieties.
  • Research Articles
    MENG Xin,WANG Shijie,JIANG Min,LI Hongyan,WANG Jinmao,YANG Minsheng
    Quercus mongolica Fisch is a native species at the temperate zone of East Asia, and is highly valuable considering its application and economic potential. Trihelix transcription factors are related to plant light response, growth and development, and abiotic stress. In order to study the performance of Trihelix transcription factors in Quercus mongolica under different shading and water stress, 34 QmTHs (designated QmTH01 to QmTH34) were identified from the genome of Quercus mongolica by bioinformatics analysis. By clustering analysis with 29 Trihelix transcription factors identified in Arabidopsis thaliana, the Trihelix transcription factors can be divided into five subgroups including GT-1, GT-2, GT-γ, SH4 and SIP1. QmTHs were found on 10 chromosomes of Quercus mongolica, encoding for the putative proteins ranged from 189 to 897 aa, with isoelectric points ranging from 4.58 to 9.78. A total of 14 different cis-acting elements were identified in the promoters of QmTHs, in which the elements related to methyl jasmonate response, abscisic acid response and light response were often found. According to gene expression analysis under different shading and water stress, the transcripts of QmTH01QmTH14QmTH22QmTH24 and QmTH33 were relatively high under high light intensity, and significantly down-regulated with the decrease of light intensity, indicating that these five genes were involved in the growth physiology of Quercus mongolica under high light response. The expressions of QmTH06QmTH17 and QmTH24 were significantly up-regulated under watering treatments (April, May, June, July and August; once per month), indicating that these genes possibly mediated the response of Quercus mongolica to water stress.
  • Review
    LI Hongchao,WANG Xiaonan,LI Ziwei,SUN Yufeng,CAO Kun,ZHAO Yue
    The industrial hemp (Cannabis sativa L.) as an important special economic crop, has implemented the development of the whole industrial chain. Its bast fiber is a significant raw material and has been widely used in textiles, papermaking, home furnishings, insulation materials, construction materials, and auto parts and composites. China has stronger academic and applied research experiences in industrial hemp, and the derived textile products are highly competitive in the global market. Due to the increasing yield and quality demand for textile fibers, it is necessary for researchers to breed high-quality, high-yield fiber varieties. The genome-wide association study (GWAS) can reveal the association between phenotype and genotype, thus becoming of interest in gene mining, stacking of multiple elite genes alleles, analyzing the population genetic structure and finally breeding for novel varieties showing high-yield, high-quality, disease resistance, and stress resistance. At present, GWAS is widely used in cotton, rice, corn, wheat and other crops, and increasingly used in industrial hemp and other major hemp fiber crop. Thus, the review summarizes the application of GWAS in industrial hemp and briefly proposes the research focuses that remained yet conducted, in order to provide insights for the application of GWAS technique in industrial hemp.
  • Research Articles
    WU Herao,REN Qingyan,CHEN Ying,HUANG Dayu,CHEN Siye,WEI Qi,LIU Yingzhao,JIANG Yong,YANG Qinghua,WU Xiulin,TIAN Jingwei,WU Jiasheng,YANG Shengan,CHEN Taolin
    This study analyzed the quality chemical composition characteristics and genetic diversity of Camellia yungkiangensis, a special tea germplasm resource in Guizhou, in order to provide scientific basis for its development and utilization and the cultivation of new special tea varieties. 121 Camellia yungkiangensis germplasms collected from Moon Mountain, Qiandongnan Prefecture, Guizhou Province, China, were subjected to analyze 21 main quality chemical components, such as water extracts, tea polyphenols, free amino acids. Their quality characteristics and genetic diversity were evaluated by genetic diversity analysis, principal component analysis, cluster analysis, correlation analysis, and the elite resources were identified. The variation coefficient of 21 quality chemical components in 121 resources was 5.70-119.69, with an average of 32.84%, and the genetic diversity index was 1.47-2.08, with an average of 1.95. Based on the correlation analysis results of 21 quality chemical component indexes, there were 42 pairs of traits with extremely significant positive correlation, 14 pairs with significant positive correlation, 10 pairs with extremely significant negative correlation, and 10 pairs with significant negative correlation. The principal component analysis showed that the characteristic values of the first seven principal components were over 1, with the cumulative contribution rate of 76.84%. The comprehensive score of the quality chemical components of each individual plant resource on each principal component was obtained by the factor score coefficient matrix, and 12 individual plant resources with high comprehensive score of the quality chemical components were selected. Cluster analysis showed that 121 Camellia yungkiangensis germplasm resources could be divided into 6 groups at the Euclidean distance of 18.0. The 121 Camellia yungkiangensis germplasm resources were identified with high tea polyphenols (≥20.0%), low caffeine (≤1.5%) and high theobromine (≥2.5%), of which 72 were high tea polyphenols (≥20.0%) and high water extracts (≥45%). These Camellia yungkiangensis germplasm resources, which showed high tea polyphenols, low caffeine and high theobromine, represent rich genetic diversity and have the potential to cultivate new varieties of specific tea plants.
  • Research Articles
    KANG Xilu, HAN Bohui, WANG Xiao, HAN Haiming, ZHOU Shenghui, LU Yuqing, LIU Weihua, LI Xiuquan, YANG Xinming, ZHANG Jinpeng, LI Lihui
    Journal of Plant Genetic Resources. 2024, 25(2): 193-205. https://doi.org/10.13430/j.cnki.jpgr.20230810002
    Agropyron cristatum L. (2n = 4x = 28, PPPP) with a large amount of alien elite genes are valuable genetic resources for the genetic improvement of wheat. According to previous studies, the genes on chromosome 1P of A.cristatum can improve plant leaf shape. However, it is unclear that the leaf shape changes and possible linkage drag exist in the translocation lines. The aim of this study is to detect the genetic effect of wheat-A.cristatum translocation lines T1PS·1AL and T1AS·1PL on major agronomic traits in different wheat backgrounds, in which wheat-A.cristatum translocation lines 1PS and 1PL were crossed with eight common wheat varieties, followed by investigation and analysis of agronomic traits in F2 segregation population. The results showed that A.cristatum chromosome short arm 1PS reduced the length of top third leaves and its plant height reduction level was 3-8 cm while no significant difference on yield traits were discovered. Furthermore, the plant phenotype of the translocation line T1AS·1PL were shaped with a decrease in the grain yield than those of non-translocation plants. Offspring performance of translocation Chromosome in related to both wheat genetic backgrounds and A.cristatum alien chromosome. Finally, we screened 75 F2 individual plants with favourable leaf shape and unchanged yield traits to be used for wheat breeding. In conclusion, this study reported two pre-breeding germplasms of wheat-A. cristatum 1P translocation lines had significant genetic effects on plant architecture improvement, which could guide the future utilization of A. cristatum 1P chromosome translocation fragments.
  • Research Articles
    WANG Yong,SUN Feng,LI Yuling,SU Laiman · AI Zezi,WU Guohong,GUO Pingfeng
    The aroma profiles of core grape germplasm resources in the Turpan region were evaluated to provide reliable data for the improvement of the breeding efficiency of different aromatic grape varieties. In this study, the terpenoid profiles and the genetic loci controlling these components were analyzed in 27 grape varieties. The fruit aromatic phenotypes were analyzed and compared among the different varieties to identify aromatic types most suitable for breeding. These varieties were classified based on four flavors, namely, strawberry, no aroma, rose, and mixed aroma. Twenty-six terpenoids were detected in these varieties. While these terpenoids were found in all aromatic categories, there were significant differences in the compounds and concentrations between the different categories. The rose-flavored varieties showed higher terpenoid concentrations than the varieties with strawberry or no aroma. The significant differences were also observed among the different rose-flavored varieties.The content of nericanol, citronel and rose ether was higher than the average content of the other three fragrant varieties. The main terpenoids identified in the rose-flavored varieties were linalol, geraniol, nerolol, citronellol. At the major terpene regulatory genetic loci, three genotypes including the dominant homozygous T/T, heterozygous G/T, and recessive G/G were detected in the 27 grape varieties. Sunshine Rose and Zaokangbao were T/T; coreless white, Red Earth, Jufeng, white banana, coreless white heart, and SP1153 were G/G; other varieties were G/T. The findings suggested that Sunshine Rose and Zaokangbao were ideal breeding materials for the rose aroma. Zaoshou Musk, fragrant Concubine, noble Concubine rose, Italy, oasis gem, and seedless Cuibao varieties had strong or relatively strong rose aroma and carried the heterozygous G/T genotype, and these varieties could be used for breeding via by self-crossing or cross-breeding.
  • Research Articles
    QI Hang,WANG Wan,TANG Xiaofei,XUE Yongguo,CAO Dan,LIU Xinlei,LUAN Xiaoyan,DU Jidao,QIU Lijuan
    Soybean is an important legume crop in the world, and serves as the main donor of protein and oil for human diet and animal feeding. The protein and oil content are genetically controlled by multiple genes, and are largely environment-dependent. It is of great significance to explore high protein and oil loci in targeted breeding of new soybean varieties. In this study, a genetic segregation population including 880 families was generated by Heinong 84 (high yield and quality) crossed with Jinghe 4 (high protein content), and subjected for the protein and oil content quantification. The genotyping was conducted using ZDX1 SNP array and SSR molecular markers, combine. Two protein QTL and two oil QTL were identified through the complete interval mapping method (ICIM-ADD) using QTL IciMapping 4.2. qPro_11_1 and qOil_11_1 were co-localized in an interval of 126.27 kb between the molecular markers SSR_11_1087 and SSR_11_1090, showing the genetic contribution rate of 4.05% and 3.23% respectively, as well as five annotation genes in the region. qPro_14_1 and qOil_14_1 were co-localized between the molecular markers SSR_14_0421 and SSR_14_0429, with the interval size of 246.09 kb with 15 annotation genes, showing the genetic contribution rate of 4.67% and 7.13% respectively. Collectively, this study identified the QTL loci on protein content and oil content, thus laying a foundation for the marker-assisted selection breeding and gene map-based cloning of soybean with high protein and high oil content.
  • Research Articles
    OUYANG Yinan,LIU Yang,PENG Jiashi,CHEN Yuanyuan,ZHAO Hui,HE Yuting,ZHAO Xinyu,TANG Xinke,ZHOU Meiliang
    The transcriptome analysis of tartary buckwheat identified a flavonol synthase gene FtFLS1. In order to further understand its structure, function and diversity in tartary buckwheat genome, we identified 104 members of FLS gene family with 10 subgroups, in which FtFLS1 was found in DF8 subgroup. Promoter analysis revealed two MeJA response elements at the upstream of 1500 bp sequence. We analyzed the expression of FtFLS1 in different organs and its response to MeJA treatments. The transcriptional level of FtFLS1 in stems and leaves was comparable but higher in roots. Expression of FtFLS1 also increased significantly with the treatment of MeJA. We subsequently cloned the CDS sequence of FtFLS1, and then generated FtFLS1 over-expressed hairy root lines of tartary buckwheat and detected their flavonoid content. Over-expression transformants over accumulated the downstream products of FLS, which including kaempferol, quercetin and rutin, while the contents of dihydrokaempferol and dihydroquercetin, the substrates of brass synthetase, decreased significantly. Furthermore, we analyzed the diversity of FtFLS1 gene in different populations of tartary buckwheat, and found that Northern landraces, Southwestern landraces and Himalayan wild accessions present obvious differentiation. The results are helpful for understanding the FtFLS1-mediated synthesis of flavonoids and the domestication process of buckwheat.
  • Research Articles
    CHEN Lunyan,ZHU Yating,LU Aixian,WU You,JI Hongyu,Chen Zhiqing,WU Shasha,ZHAI Junwen
    The species diversity of Calanthe R. Br. is rich. However, under the influence of global warming, extreme high temperature weather frequently occurs, which exacerbates the harm of abiotic stress on the survival and reproduction of Calanthe. In this study, six species of Calanthe were analyzed for heat tolerance via applying means of high-temperature semi-lethal physiological experiments. Calanthe argenteostriata C. Z. Tang & S. J. Cheng and C. tricarinata Lindl., which were identified to be heat tolerant or sensitive, respectively, were used for transcriptome sequencing and identification of differentially-expressed genes (DEGs) under heat stress treatment conditions. In addition, their transcriptional profiles at different temperatures were detected by real-time fluorescent quantitative PCR technology. The research results were included: (1) The heat tolerance of six species of Calanthe is ranked from weak to strong: C. tricarinata Lindl., C. graciliflora Hayata, C. triplicata(Willem.)Ames, C. herbacea Lindl., C. sinica Z. H. Tsi, C. argenteostriata C. Z. Tang & S. J. Cheng. (2) Gene families responsible to heat stress were identified, including HSP, HSF, LEA, XTH, TIL. (3) In C. tricarinata Lindl., the up-regulated expression threshold of DEGs was 30 ℃, and the temperature over 30℃ might cause heat damage. In C. argenteostriata C. Z. Tang & S. J. Cheng, nine DEGs were highly expressed at 40 ℃, possibly resulting in an improvement of tolerance to heat stress. This study explored the response of Calanthe to heat stress at the molecular level, provided important clues for identifying key genes of heat tolerance and cultivating garden heat tolerant plants, which might provide reference in modern garden breeding.
  • Research Articles
    LIU Jin,LE Si,ZHOU Huiying,HU Jiaxiao,MENG Bingxin,LUO Wenjing,LI Maomao,YU Liqin
    By taking the opportunity of the Third National General Survey and Collection Action of Crop Germplasm Resources, rice landraces were investigated and collected from different counties and cities in Jiangxi province, P. R. China. From 2017 to 2019, 321 rice landraces were collected to identify the morphological characteristics, main agronomic traits, yield and quality traits in the field. Based on the collection sites, they were collected from 11 cities, with enrichments at six cities including Jiujiang, Shangrao, Yichun, Fuzhou, Jian and Ganzhou. These regions have more mountainous and impoverished with traffic inconvenience, in which farmers have the tradition to proceed food with rice landraces. There are two subspecies of Xian and Geng, mainly Xian, which can be divided into early rice, medium rice and late rice based on the maturity. The sticky rice and glutinous rice account for 38.0% and 62.0%. There have 35 red rice and purple black rice germplasm resources. These results showed that rice landraces germplasm resources with good genetic diversity in Jiangxi province, most of which are yellow, no or short awn, suitable panicle, moderate blade and stem angle, lodging resistance, and suitable seed holding. Fifteen elite germplasm resources with feasible head date, large panicle, high seed setting rate and big thousand grain weight, as well as 12 elite glutinous rice and colored rice were selected. Collectively, this study reported a resource of rice landraces which has great potential in breeding of new rice varieties.
  • Research Articles
    CAO Yilin,CAO Zuozeng,HAN Xinjing,XING Yanan,BI Yange,GUO Xudong,WANG Hui,WANG Fu,ZHU Wenying
    This study investigated a special tomato inbred line 85-6 with the parthenocarpy and self-incompatibility. Through the observation of flower appearance, pollen viability and ovule development, 85-6 was found with normal flower structure, pollen activity and ovule development, thus ruling out the abortion of pistil or stamen. Based on the fertility variations of self-pollination, and artificially-assisted self-pollination and hybridization experiments at different temperature, 85-6 showed self-incompatibility under normal temperature conditions, and produced seedless fruit after self-pollination, as well as normal hybrid offspring whenever serving as male or female parents. Under temperature stress (daily average temperature <10 ℃ or >35 ℃) at flowering stage, 85-6 became complete pollination and fertilization to obtain seeded fruits, and its offspring seeds showed 29.75% seed germination rate. After emasculation at the bud stage, whenever under normal or lower temperature conditions, t85-6 was able to produce seedless fruit, thus indicating the characteristics of parthenocarpy. Collectively, the material of 85-6, as a newly-identified germplasm showing the parthenocarpy and self-incompatibility, provided a basis for the parthenocarpy and self-incompatibility breeding, and further deciphering the functional mechanisms.
  • Research Articles
    ZHAO Chunfang,CHEN Tao,YAO Shu,ZHAO Qingyong,ZHAO Ling,ZHOU Lihui,ZHU Zhen,WANG Cailin,ZHANG Yadong
    Grain quality deterioration during rice aging storage has caused serious losses to rice production and management. It is of great significance to carry out research on storage tolerance and identify rice varieties with high storability. In this study, 197 semi-waxy japonica varieties, 117 common japonica varieties and 14 waxy japonica varieties were used. The storage tolerance characteristics was analyzed at the artificial high temperature and high humidity condition using the evaluation index of the storage tolerance index (SDI) that defines based reduction percentage of germination rate before and after aging. According to SDI, these genotypes were divided into four groups: group I was the high storability type, 75%≤SDI<100%, including 8 semi-waxy japonica rice and 15 common japonica rice; group II was the relative storability type, 50%≤SDI<75%, including 32 semi-waxy japonica rice, 44 common japonica rice and 1 waxy rice; group III was the less storability type, 25%≤SDI<50%, including 82 semi-waxy japonica rice, 32 common japonica rice and 4 waxy rice; group IV was non-storability type, 0≤SDI<25%, including 75 semi-waxy japonica rice, 26 common japonica rice and 9 waxy rice. The storage tolerance of semi-waxy japonica rice, which was higher than that of the waxy rice, was lower than that of common japonica rice. The analysis of storage tolerance among different growth-development types showed that only the early-maturing medium type in both of semi-waxy and common japonica rice had the lowest storability value. Using the reduction percentage of freshness value (RPFV), semi-waxy japonica rice showing lower storability than common japonica rice and higher storability than waxy japonica rice was observed. Through the comprehensive evaluation of SDI and RPFV, four semi-waxy japonica rice (BG26, BG69, BG81 and BG164) and nine common japonica rice (Nanjing-qinggu, CG10, CG23, CG25, CG28, CG32, CG38, CG49 and CG71) were obtained with high storability. Collectively, the research provided germplasm materials applicable for the storability improving of rice varieties and exploring the storage tolerance gene resources.
  • Research Articles
    YAO Yaxuan,YUAN Jun,LU Mengqi,PENG Shaofeng,WANG Ting,TAN Xiaofeng,ZHOU Junqin
    Camellia oleifera Abel., which shows self-incompatibility (SI) and low natural fruit setting rate, has seriously affected its yield production and the following development in industry. To uncover the function of Peroxidase (POD) in self-incompatibility, four POD genes CoPOD1/2/3/4 were cloned from C. oleifera by reverse transcription cloning technology. The length of gene coding regions were 1086, 1011, 1020 and 1218 bp, encoding 361, 336, 339 and 405 amino acids non-transmembrane proteins with signaling peptides, respectively. Although lower sequence similarity among the CoPOD1/2/3/4 proteins is observed, they all contain peroxidase active sites and heme ligand sequences near peroxidase. The phylogenetic analysis revealed closely sequence homology of CoPOD1/2/3/4 to those of Camellia sinensis (L.) O. Ktze. Real-time fluorescence quantitative results showed that PODs were significantly up-regulated, followed by decreased expression within 24-48 h after self-pollination. The transcripts of CoPOD1/3/4 were higher than cross-pollinated in pistills at 36 h after self-pollination. The POD activity in the pistil of self-pollination was higher than that of cross-pollinated within 24-72 h, showing the highest expression peak at 36 h. The POD activity in the pistil of the cross-pollinated was in dynamic balance at early stage, with significantly up-regulated after 72 h. We speculate that the POD genes might be involved in the programmed pollen tube death of C. oleifera after self-pollination, thus participating in the self-incompatibility reaction. Collectively, this paper provides reference for further research on self-incompatibility mechanism in C. oleifera.
  • Short Communications
    ZHANG Shangwen,YANG Tianwei,HUANG Shiyu,LI Ting,GAO Manrong,TIAN Shanshan,HE Longfei,ZHANG Xiangjun
    Uvaria kweichowensis is a native plant species in China, and the wild populations are relatively small with narrowed geographic distribution. In order to systematically understand its quantity, distribution status and utilization in Guangxi province, we carried out the investigation and collection of Uvaria kweichowensis germplasm resources in nine counties through field visits and questionnaire surveys, and a total of 95 Uvaria kweichowensis sampleswere collected from 2016 to 2022. The survey results show that Uvaria kweichowensis is a perennial vine with mature leaf leathery, being mainly distributed in the karst rocky mountain area with the attitude of 650 to 1100 meters in nine counties such as Longan County and Tiane County in Guangxi. The number of germplasm resources in wild populations were scarce, and individuals often grew individually without protection. The local people have the traditional habit to collect the leaves of Uvaria kweichowensis for diseases treatment and tea drinking. In addition, we deployed the seed sowing or branch cottage, in order to collect and select the elite germplasm resources. The results showed that low survival rate of Uvaria kweichowensis, the germination rate of seeds from different sources was 25.7 % -34.4 %, and the survival rate of cuttings was 4.4%-14.4%. Collectively, this study discussed the main factors harmful to this species and the solution for protection of Uvaria kweichowensis, which might provide the reference for the protection, excavation and innovative utilization of the germplasm resources of Uvaria kweichowensis in Guangxi province, China.
  • Research Articles
    XUE Tianyuan,LU Jinchunzi,HE Sixiao,YU Yi,CHEN Jingdong,WEN Jing,SHEN Jinxiong,FU Tingdong,ZENG Changli,WAN Heping
    Journal of Plant Genetic Resources. 2024, 25(3): 356-372. https://doi.org/10.13430/j.cnki.jpgr.20230827002
    The salt-alkali tolerance of 286 brassica rapeseed strains at the seedling stage was identified in this study. The indexes of leaves number, green leaves number, green leaves rate,shoot length, root length, and root weight under salt-alkali stress were determined through a hydroponics test. Various methods including comprehensive assessment value (D-value), extreme material screening analysis, correlation analysis, principal component analysis, membership function analysis, frequency analysis and stepwise regression analysis were used. A comprehensive evaluation model for saline-alkali tolerance was established for different genotypes of rapeseed germplasm at the seedling stage and appropriate evaluation indexes were selected. Under saline-alkali stress conditions, leaves number showed a negative correlation with plant height but the correlation coefficient between them was not significant; however other traits showed positive correlations that reached a significant or extremely significant level. Principal component analysis was employed to synthesize 7 salt-alkali tolerance indexes into 4 principal components which could represent 88.349% of the original data information on rape′s salt-alkali tolerance. Based on the relative importance (weight) of these four principal components, a comprehensive evaluation value (D-value) for salt and alkali tolerance among different genotypes was obtained. Four alkali-salt-tolerant brassica napus germplasms and four saline-sensitive germplasms were screened using membership function analysis and extreme material screening analysis respectively. The results from stepwise regression analysis indicated that salinity tolerance in brassica napus germplasm resources could be determined by measuring the green leaves number, green leaves rate, shoot weight as well as root length and root weight at the seedling stage while estimating D-value using regression equations.
  • Research Articles
    JIA Long,LUO Gaoling,CHEN Yanhua,WANG Suhua,CHEN Hongling,LIU Changyou,DU Jidao,WANG Lixia
    Wild adzuki bean are important gene resources for genetic improvement of cultivars, however, pod shattering and hard seededness are classical characters of wild genotypes, and are disadvantage traits in breeding. In the present study, we used a recombination inbred line (RIL) population, developed from a cross between a cultivar and a wild genotype(Vigna angularis var. nipponensis), to identify QTL loci related with pod shattering and hard seededness using SSR markers. The results showed that the ratio of pod shattering (PS), the number of pod curling (NPC) and the ratio of hard seededness (HSN) were not fitful for normal distribution, but had continuous variation. Eleven linkage groups were constructed using 111 SSR markers with a total length of 3813.5 cM and 34.35 cM for intervals. A total of 19 QTLs were detected for PS and NPC in 2021 and 13 were detected in 2022. Two QTLs were repeatedly detected to be related with the NPC and 3 were with PS. There were 4 QTLs that related with the hard seededness and the one on LG11 were also repeatedly detected with PS in 2021 and 2022, and NPC in 2022. The present results provided insights for fine mapping of these domesticate-related traits and investigating the functional mechanisms.
  • Research Articles
    ZHOU Ya,ZHANG Xiang,ZHAO Quan,SUN Jianqiang,WANG Xiaobo,QIU Lijuan
    Double haploid techniques have been widely used to accelerate plant breeding, and in recent years, maize (Zea mays L.) lines containing mutations in the membrane protein (DMP) of the functionally unknown domain DUF679 have been used as haploidy-induced lines. In this study, soybean DMP genes with more than 60% homology with maize DMP gene were searched and bioinformatic analysis was performed. The molecular mechanism and biodiversity of GmDMP gene in soybean were investigated by using 2214 resequencing databases. The analysis results show that: GmDMP1Glyma.18G097400) and GmDMP2Glyma.18G098300) have high evolutionary affinity with maize DMP gene. The full length of genes is 645 bp, the homology rate of amino acid sequence is over 95%, and the number of encoded amino acids is completely consistent with the isoelectric point. The phosphorylation distribution differs at only one site. Both GmDMP1 and GmDMP2 genes have the same domain DUF679, which is more likely to locate in the ER, and both are transmembrane non-secreting hydrophilic proteins. There were 3 and 1 non-synonymous mutations of GmDMP1 and GmDMP2 genes in 2214 germplasm resources, respectively, consisting of 3 and 2 haplotypes. GmDMP1H3 has been strongly selected during domestication, and the mutation site of the GmDMP1H1 and GmDMP1H2 haplotypes is located in the DUF679 domain. It is possible to obtain a haploid inducible line by mutating two DMP genes in soybean, thus shortening the breeding life of soybean.
  • Research Articles
    GAO Huihui,DONG Bin,WANG Xingyue,DONG Linxin,MAYAMIKO Masangano,SHEN Yifan,TANG Pengbin,WEI Pengcheng,YANG Lei,QIU Lijuan,WANG Xiaobo
    The beany flavor and potential allergenicity of soybean caused by Lox and 7S globulin limit human consumption. Breeding for soybean varieties with Lox and 7S globulin deficiency or high 11S/7S ratio is, therefore, of interest to improve the nutritional value and process different soybean products. In this study, the protein subunit composition of 2713 soybean germplasms was determined by the optimized soybean protein SDS-PAGE extraction method. The soybean germplasm resources with different protein subunit composition types were excavated, and the genetic and environmental factors affecting the protein subunit content were analyzed. The results identified a significant negative correlation between 7S globulin and 11S globulin. The 11S/7S ratio of local varieties was higher than that of modern varieties. A significant difference on the content and ratio of 7S and 11S globulin were observed in samples harvested from years. There was no significant correlation between 7S and 11S globulin and their subunits and protein and oil content. A total of 15 soybean germplasm resources with specific composition of soybean protein subunits were screened, including four showing 11S/7S ratio greater than 3.0 without subunit structural variation, five with Lox deletion, one with α' subunit deletion, two with α subunit deletion, one with β subunit deletion, one with 11S/7S ratio greater than 3.0 and Lox deletion, and one with complete deletion of 7S subunit. The identification of these germplasms laid a material foundation in breeding of high-quality soybean varieties applicable for different soybean products.
  • Review
    LI Jie,LI Tingge,WANG Tongxin,WANG Jian
    Anthocyanins and betalains are both natural water-soluble pigments with similar distribution and functions in plants. Anthocyanins is a type of phenylalanine-derived pigment, and the betalains is a tyrosine-derived pigment that contains the chromophore betalamic acid. Anthocyanins are widely distributed in plants, but in Caryophyllaceae plants, betalains present instead of anthocyanins. It is worth attention that anthocyanins and betalains have never been found in the same plant at the same time. This mutual exclusion may be raised by accident in evolution, or the co-existence of both pigments would bring troubles in plant survival. This article reviewed and discussed the general characters of anthocyanins and betalains, the biosynthetic pathways and their regulations, the cases of induced co-existence of the two pigments, and the possible reasons for the mutual exclusion between the two pigments. In addition, the possible mechanism of the mutual repulsion of the two pigments, the research focuses for the future, and the possible application value in molecular breeding are also prospected. The purpose of this article is to better understand the relationship between anthocyanins and betalains through the review and prospect of previous studies, reveal the mechanisms for their mutual exclusion, as well as provide new ideas and methods for research and application in related fields.
  • Research Articles
    SUN Zhiguang,LU Baiguan,LIU Jinbo,LIU Yan,LI Jingfang,CHI Ming,CHEN Tingmu,LI Jian,YANG Bo,LIU Xiaomin,WANG Baoxiang,XU Dayong
    QTL mapping of germinability under submergence condition and pyramided effect analysis of stable sites were carried out, thus laying a foundation for fine mapping of QTL for germinability under submergence condition and marker-assisted breeding. Using an F2:3 population with 144 individuals derived from a cross between WR-4 (a weedy rice with strong germinability under submergence condition) and Guangbaixiangzhan (a susceptible indica variety, GBXZ), a high density genetic map containing 825 bin markers was produced based on 1K mGPS SNP chip. Ten QTL conferring tolerance to hypoxia were identified by complete interval mapping (ICIM). These QTL were found on chromosomes 3, 4, 7, 8, 9, and 10, with LOD values ranging from 3.6 to 21.3, explaining phenotypic variation of 3.0%-21.1%. Two major QTL (qGS4-1 and qGS7-1) withhigh LOD value and high phenotypic variance were repeatedly detected, and both loci could be the candidate for future gene cloning studies. According to the genotyping of bin markers in each QTL interval, different progenies were classified into WR type and GBXZ type. By further data processing and analysis of QTL stacking, it was found that individuals with more pyramided synergistic alleles showed longer coleoptile under submergence condition. Thus, these lines hosting multiple synergistic alleles might provide innovative resources for breeding rice cultivars with high germinability under submergence condition.
  • GERMPLASM INNOVATION
    LIU Fangfang,ZHANG Qiqi,WAN Yingxiu,CAO Wenxin,LI Yao,LI Yan,ZHANG Pingzhi
    Fusarium head blight (FHB) is a devastating disease of wheat, which seriously reduces grain yield and quality. It is an effective way to prevent the damage of FHB by introducing resistant genes into wheat varieties. In this study, the wheat line L06486 that carries the FHB resistance genes Fhb1Fhb2Fhb4 and Fhb5, was used as the donor and crossed with the variety Jimai 24, which was high-yield and widely adaptive across the Huanghuai area of wheat planting, but highly susceptible to FHB. Then the acquired plants were crossed with the dwarf wheat line 206A. A large spray facility was used to carry out the fog-way inoculation of spore-fluid through scab on the ears of wheat, across F3 to F6 multiple generations and populations. The resistance of the selected F7 stable lines was validated by floret-inoculation and their resistant genes composition was identified with specific markers for Fhb1Fhb2Fhb4 and Fhb5. It showed that 106 F7 lines had improved resistance to FHB in comparing with the recipient parent Jimai 24. Out of these 106 lines, 98 lines showed a range of moderate susceptible to high resistance, and 105 lines carried 1 to 4 FHB resistance genes each. The frequencies of Fhb1Fhb2Fhb4 and Fhb5 presence were 96.23%, 41.51%, 18.87% and 87.74%, respectively. Lines with single or multiple Fhb genes showed higher resistance to FHB than those with none of Fhb gene; the more Fhb genes it carried, the higher resistance to FHB. Altogether, these selected lines will be valuable in improving the FHB resistance in Huanghuai wheat planting region in the future.
  • Short Communications
    LU Mingyan,WANG Qiang,YAN Xingkai,WU Chunhao,ZHAO Ying,ZHANG Maojun
    To provide reference for pear breeding, the genetic basis of fruit traits was investigated through three consecutive years, by taking use of F1 plants of seven hybridization combinations with Yanbiandaxiangshui as female parent, Hongxiangsu,Zaosu,Red clapp favorite,Jinsu,Jinmi,Eliyihao and Yunhongyihao as male parents. The results of F1 hybrids showed a central tendency at seven traits, including single fruit weight, fruit diameter, fruit length, stalk length, stalk thickness, fruit shape index, and soluble sugar content. The single fruit weight has a strong genetic tendency towards small fruit. The coefficient of variation at soluble solid content and fruit shape index was small, while the genetic transmissibility were high. The inheritance of stalk diameter tended to be medium to low, while the inheritance of stalk length, fruit diameter and fruit length tended to be medium to high. The traits including background color, persistency of sepals, depth of eye basin, flesh texture, juice, and flavor were greatly contributed by the maternal parent.Width of eye basin inherited tend to medium and aroma was influenced by male parents. The cover color variation was observed following the laws of intergenerational inheritance. Collectively, the results provided reference for studying the genetic laws of pear fruit traits and selecting parents for hybrid breeding.
  • Research Articles
    MENG Zhaoyang,KOU Yaping,GE Hong,LIU Ran,NIU Pengfei,JIA Ruidong,ZHAO Xin,LYU Yingmin,YANG Shuhua
    Improving the fragrance characteristics through hybridization is an important way of fragrant flower breeding. In this study, Headspace-Solid Phase Microextraction-Gas Chromatography-Mass Spectrometry (HS-SPME-GC-MS) was employed to determine the volatile organic compounds (VOCs) in blooming petals of the rose variety Mantingfanghua and its parents. Comparison analysis of VOCs showed that 25, 36 and 22 VOCs were identified in the blooming petals of Mantingfanghua, its paternal species Rosa beggeriana Schrenk and maternal variety Queen Elizabeth, respectively. The totally identified 59 components can be sorted to 8 major compounds based on their chemical structures, including alcohols, terpenes, esters, hydrocarbons, ethers, aldehydes, ketones and acids. Mantingfanghua has 10 components in common with Rosa beggeriana Schrenk, while 13 in common with Queen Elizabeth; Mantingfanghua has the VOCs composition in higher similarity to its maternal variety. The total VOCs content in Mantingfanghua was 579.70 ng/g, which was lower than that in its paternal species (13939.42 ng/g) and its maternal variety (1157.10 ng/g). The contents of terpenoids and benzenoids/phenylpropanoids were lower in Mantingfanghua than those in its parents; in opposite, the contents of sesquiterpenoids in Mantingfanghua were higher than those in its parents. Meanwhile, the content of fatty acid derivatives in Mantingfanghua fell in between those in their parents. Principal component analysis showed that the β-Cubebene, β-Cadinene, β-Caryophyllene were the main VOCs that may affect the fragrance from Mantingfanghua. This study provides insights for the genetic improvement of rose floral fragrance metabolism, which has important value for both theoretical and practical purpose.
  • Short Communications
    LI Shuangmei,HUANG Xinfang,ZHU Honglian,PENG Jing,LI Feng,ZHONG Lan,JI Qun,KUANG Jing,KE Weidong
    The main nutrient components of rhizome were determined and evaluated in 20 seleng wormwood germplasm resources preserved in National Germplasm Wuhan Aquatic Vegetable Resource Garden. The dry matter, protein, soluble sugar and crude fiber contents were 17.90%, 3.28%, 10.14% and 1.09%, respectively. Based on the stem color, the contents of dry matter, protein, and soluble sugar were classified (red > green > white). The protein content of green if compared to white seleng wormwood was equal, and the crude fiber content was further classified (white > red > green). According to the blade shape, the contents of dry matter, protein and soluble sugar of wormwood rhizome were higher in broken leaf-seleng wormwood in comparison to willow-leaf-seleng wormwood, while the crude fiber content was observed opposite in both types. However, for each of nutrient components, no significant difference was observed between each of two types. The nutritional quality of red seleng wormwood and broken leaf-seleng wormwood was relatively better. The highest value on the contents of dry matter, soluble sugar and crude fibre was detected in Lishilouhao, and the highest protein content was found in Shayanglouhao. The partial correlation between dry matter content and protein content and that between dry matter content and soluble sugar content were significantly positive. The partial correlation between protein and soluble sugar was significantly negative.
  • Research Articles
    LI Yanxiao,ZHANG Chunlan,XU Xingyuan,CHEN Yanqiu,XIANG Dianjun,LIU Peng
    To obtain the sequence information of salt-tolerant genes in castor bean, we conducted a study to explore differentially expressed genes and related metabolic pathways under salt stress. We used seedling leaves of castor bean (cultivar Tongbi No. 5) treated with salt stress (300 mmol/L NaCl) for 0, 12, and 24 hours as experimental materials. Transcriptome sequencing analysis was performed using high-throughput sequencing technology. The results showed that there were 4822 and 3103 differentially expressed genes at 12 and 24 hours of salt stress, respectively. Co-expression pattern clustering analysis was conducted on the shared 1872 differentially expressed genes, and three expression patterns were identified. KEGG pathway analysis revealed significant enrichment of three pathways, namely valine, leucine, and isoleucine degradation (ko00280), plant circadian rhythm regulation (ko04712), and starch and sucrose metabolism (ko00500), in the adaptation process to salt stress. GO functional enrichment analysis showed that most differentially expressed genes were enriched in biological processes, with the highest enrichment in cellular processes (GO:0009987) and response to non-biological stress (GO:0009628). In addition, a total of 19 transcription factors were found to be involved in the salt stress response of castor bean. In the plant hormone signal transduction pathway, 42 differentially expressed genes were identified, with 97.6% of genes showing upregulated expression at 12 and 24 hours. Furthermore, we identified differentially expressed genes involved in photosynthesis, antioxidant regulation, and Na+, K+, and Ca2+ transport related to salt stress in castor bean seedlings. qRT-PCR results confirmed the reliability of the above experimental results. In conclusion, this study provides a theoretical basis for the exploration of salt-tolerant genes and the analysis of salt stress adaptation mechanisms in castor bean.
  • Research Articles
    ZHAI Linan,TANG Qingjie,ZHOU Shizhen,ZHOU Bangji,YUN Yong,WANG Huijian,HAN Yisheng,XING Funeng,YAN Xiaowei
    In order to comprehensively evaluate and analyze the resistance of Hainan common wild rice to leaf blast and ear neck blast, 2002 accessions collected from 11 different cities/counties in Hainan province were artificially inoculated with leaf blast at the seedling stage in the field for two consecutive years in 2022 and 2023. In addition, 995 accessions that had been pumped were artificially inoculated for ear neck blast resistance. 494 (24.68%) were identified to be resistant to leaf blast, among which 7 were immune and 17 were highly resistant. In the field, 1160 (57.94%) were resistant to leaf blast, of which 24 were immune and 233 were highly resistant. Out of 995 accessions that were tested for ear neck plague, 506 were resistant accounting for 50.85%, among which 23 were immune and 136 were highly resistant. The results showed that common wild rice accessions in Hainan were generally resistant to leaf blast or ear neck blast. The plant architecture in most of resistant germplasms was semi-erect or inclined, and a few showed upright or creeping. Accessions with high leaf distemper resistance were generally resistant to ear neck distemper after heading, and accessions with high immune or ear neck distemper resistance were generally resistant to leaf distemper. A total of 128 common wild rice materials with resistance to both leaf blast and ear neck blast were identified and evaluated. Collectively, this study provided a reference for the academic research and breeding utilization of rice blast resistance in Hainan wild rice.
  • Review
    HUANG Yanbo,LIN Chuhang,LIU Fengluan
    There are about 1000 species of Salvia L. in the world, and a large number of species have been developed in many aspects of medicine, ornamental, edible as well as essential oils and health care. In China, there are abundant germplasm resources including 84 species and 24 varieties, while only one native species, Salvia miltiorrhiza Bunge, is widely cultivated and used for medicinal purpose. It is urgent to investigate and classify their growth habits, morphological characteristics and horticultural characteristics, in order to promote their efficient development and popularization. Based on classical taxonomy and solid data obtained from field investigation and cultivation observation in the past 13 years, this article focuses on the classification and characterization of the horticultural characteristics of Salvia L., including six aspects, such as end-use, flowering period, flower color, flower size, stem characteristics and garden shape. Spring-flowered (April-June), summer-flowered (July-August), and autumn-flowered (September-November) types were classified according to flowering periods, while purple, blue, red, pink, yellow and white flower styles were categorized based on flower colors. There were four levels for flower sizes: small (<1.5 cm), medium (1.5-3.0 cm), medium-large (3.0-4.5 cm), and large (>4.5 cm), and three forms for stem types: trailing, cespitose, and erect. Notable flexibility were displayed in garden shape by a number of germplasms. The majority of domestic sage resources are the cespitose herbs with medium-sized (large) purple and blue flowers that bloom in the spring. This study improved the applied classification system of Salvia L., and provided reference for further development and extensive application of Salvia L. species in China.
  • Research Articles
    LI Guizhi,HUANG Donghui,WANG Lirong,WU Jinlong,MA Zhaocheng
    To investigate the genetic diversity of volatile compounds in peach fruits, 36 peach varieties were analyzed by headspace solid-phase microextraction coupled with gas chromatography-mass spectrometry, followed by ANOVA, coefficient of variation, correlation analysis, principal component analysis and partial least squares-discriminant analysis. The results showed that 77 volatile compounds were detected in 36 peach varieties, including terpenoids, aldehydes, esters, lactones, alcohols and ketones. In addition, the coefficient of variation in volatile compounds of 36 peach varieties ranged from 18% to 390%, indicating that the enrichment of volatile organic compounds diversity in different peach varieties. Based on the correlation analysis, 11 and 10 pairwise-traits were found with correlation and significant correlation, respectively, among which several traits including flesh color, variety type, stone adherence to flesh and flesh texture were correlated with aroma substance content. PCA analysis could clarify white-fleshed and yellow-fleshed peaches. Using variable importance in projection (VIP) >1 and P < 0.05 as criteria, nine characteristic volatile substances were identified and distinguishable in yellow-fleshed peaches from white-fleshed peaches, among which theaspirane was found with the highest VIP.
  • Research Articles
    YANG Zhenxin,ZHU Yajing,LU Zhuangyue,LUO Xi,SU Xin,CHENG Sili,CAI Nianhui,XU Yulan,WANG Dexin
    The growth, leaf morphology, chlorophyll synthesis and photosynthetic parameters in diploid and triploid Passiflora edulis Mantianxing were measured. The results showed that: (1) Compared with triploid plants, the triploid plants showed shorter stalk and petiole, narrower leaves and shorter distance between than that of diploid leaves, and the content of carotenoid was no significant difference. (2) The total content of chlorophyll, chlorophyll a and chlorophyll b synthesized by triploid leaves was higher in triploid. (3) During the diurnal process of photosynthesis, both diploid and triploid had a lunch break and the net photosynthetic rate (Pn), transpiration rate (Tr), stomatal conductance (Gs) and intercellular CO2 concentration (Ci) of triploid plant were higher than those of diploid plant, which were increased by 9.5%, 6.9%, 4.5% and 3.9%, respectively. (4) The variation trend of monthly photosynthesis in diploid and triploid was similar, both reaching the highest value in August and falling to the lowest value in December, both of which are single-peak curves. The PnTr and Gs of triploid Mantianxing are superior to diploid. (5) There was correlation between the indexes of the two ploidy plants, which indicated that the traits influenced and promoted each other to make the plant grow normally. The size, opening and closing of stomata significantly affected the Pn and Tr of plant leaves. These results showed that the photosynthetic capacity and light energy utilization capacity of triploid Mantianxing were enhanced with the increase of gene dose, and the accumulation of chlorophyll synthesis content of triploid Mantianxing was increased.