为对毛细管荧光电泳检测过程中出现的非特异性峰进行观察,探讨其形态及发生原因,笔者从新疆野扁桃的5 个居群中分别挑选2 份叶片提取基因组DNA,PCR产物使用毛细管电泳荧光检测。结果表明:在毛细管电泳荧光检测中,共选用4 种荧光引物,其中荧光引物FAM峰型最为正常且特异峰清晰,不常发生非特异性峰。与之相反,荧光引物ROX的非特异峰种类数量最多,且特异峰不易辨认。在6 种异常情况中,N+1 峰出现次数最多,高低峰出现次数最少。荧光引物FAM更适合于新疆野扁桃进行扩增。
Abstract
The paper aims to observe the non-special peak appeared in capillary fluorescent electrophoresis and discuss its shape and the occurrence reason. We selected 2 samples of leaves from 5 populations of wild almond respectively to extract the genome DNA, and analyzed the amplification production by using the capillary fluorescent electrophoresis. The results showed that: there were 4 kinds of fluorescent primers in the capillary fluorescent electrophoresis; the peak of fluorescent primer FAM was within a normal range, with the special peak being obvious and the non-special peak did not occur frequently; by contrast, the non-special peak of fluorescent primer ROX had the most varieties, and the special peak was difficult to discern; in 6 exceptional cases, N+1 peak occurred the most and different peaks occurred the least. The fluorescent primer FAM is more suitable for wild almond to amplify.
关键词
新疆野扁桃;毛细管荧光电泳;TP-M13-SSR
{{custom_keyword}} /
Key words
wild almond(Prunus tenella Batsch.); Capillary fluorescent electrophoresis; TP-M13-SSR
{{custom_keyword}} /
{{custom_sec.title}}
{{custom_sec.title}}
{{custom_sec.content}}
参考文献
[1]朱京琳.新疆西北部山区的野巴旦杏资源[J]. 新疆林业,1981,(2):15-16.
[2]曾斌.新疆野扁桃繁殖生物学特性及种质资源遗传多样性研究[D].新疆农业大学,2008.
[3]吕志江.新疆野扁桃居群遗传多样性分析及S基因型鉴定[D].新疆农业大学,2011.
[4]张亚兵.毛细管电泳的原理特点及其在种子检验上的应用[J].种子,1997(4):73-74.
[5]平霄飞,颜红岚,王杨健,等.毛细管电泳法快速鉴定水稻品种的初步研究[J].中国农业科学,1999, 19(4):101-103.
[6]Studer B, Asp T, Frei U, et al. Expressed sequence tag-derived microsatellite markers of perennial ryegrass (Lolium perenne L.). Mol Breed, 2008, 21: 533-548.
[7]刘欢.基于荧光检测技术的多花黑麦草EST-SSR指纹图谱的构建[J].中国农业科学,2017,50(3):437-450.
[8]秦瑞英,许学,张立平,等.小麦SSR指纹图谱及品种身份证的构建——基于毛细管电泳分析[J].中国农学通报,2017,33(34):46-55.
[9]Vikas Sharma.Identification and cross-species amplification of EST derived SSR markers indifferent bamboo species[J].SConservation Genetics,2009,10(3):721-724.
[10]易红梅.基于毛细管电泳荧光标记的玉米品种SSR高通量检测体系的建立研究[D].首都师范大学,2006.
[11]郝晨阳,王兰芬,贾继增,等.SSR荧光标记和银染技术的比较分析[J].作物学报,2005, 31(2):144-149.
[12]曾斌,李疆,李秀根,等.一种干旱区果树作物基因组DNA的提取方法[P].新疆,CN103266107A,2013-08-28.
[13]王凤格,易红梅,赵久然,等.毛细管电泳荧光检测中的异常电泳类型及原因分析[J].分子植物育种,2007, 5(6):890-894.
[14]顾丽华,平原,程莉,等.模板DNA用量对荧光STR复合扩增检测的影响[J].中国法医学杂志,2002,17(2):77-80.
[15]FRANKHAM R, BALLOU J D, BRISCOE D A.Introduction to Conservation Geneties[M].UK: Cambridge University Press,2002.
[16]FREVILLE H, JUSTY F, OLIVIERI I. Comparative allozme and microsatellite population structure in a narrow endemie plant speeies:Centaurea corymbosa Pourret(Asteraceae)[J].Molecular Eeology, 2010,S10 (4) :879-889.
[17]MAGUIRE T L, PEAKALL R, SAENGER P. Comparative analysis of genetic diversity in the mangrove species Avicennia marina (Forsk.) Vierh. (Avicernniaceae) detected by AFLPs and SSRs[J]. Theoretieal and applied Genetics, 2002, 104:388-398.
[18]Claire G Williams.Introduction to Conservation Genetics[J].SZoologica Africana,2010,38(1):192-192.
[19]肖文芳,李佐,陈和明,等.利用SSR荧光标记毛细管电泳法检测蝴蝶兰组培突变体[J].热带作物学报,2016,37(10):1938-1944.
[20]郭正兵.SSR荧光标记毛细管电泳法分析30份无花果品种的遗传多样性[J].浙江农业学报,2017,29(9):1482-1488.
{{custom_fnGroup.title_cn}}
脚注
{{custom_fn.content}}