PLANT PROTECTION
QUQing, LIUNing, ZOUJinPeng, ZHANGYaXuan, JIAHui, SUNManLi, CAOZhiYan, DONGJinGao
【Objective】 Maize ear rot caused by Fusarium verticillioides is one of the most serious diseases in maize producing areas in China. The objective of this study is to understand the differences in gene expression during the plant-pathogen interaction at different stages, and to provide a basis for pathogenic mechanism of the pathogen infection and resistance mechanism of maize. 【Method】 Illumina platform was used to sequence the transcriptome of maize kernels infected with F. verticillioides at 0, 4, 12, and 72 h. The differentially expressed genes (DEGs) of maize and F. verticillioides were screened with |log2FC|≥1, P-adjust<0.05 as threshold and clean reads were compared with genome of maize and F. verticillioides, separately. Functional annotation and enrichment analysis of DEGs were carried out by using GO and KEGG databases. Goatools software was used to analyze the expression changes of genes related to plant-pathogen interaction, MAPK signaling pathway and plant hormone signal transduction pathway. Sequencing results were verified by quantitative real-time PCR (qRT-PCR). 【Result】 A total of 140, 400 and 1 945 DEGs were up-regulated and 9, 302, and 1 784 DEGs were down-regulated in F. verticillioides after 4, 12 and 72 h interaction, respectively. A total of 293, 692, and 1 426 DEGs were up-regulated and 320, 482, and 153 DEGs were down-regulated in maize after 4, 12 and 72 h interaction, respectively. GO and KEGG enrichment analysis of DEGs showed that F. verticillioides grew in intercellular space at the early stage of pathogen infection. The DEGs were enriched in RNA biosynthesis, cell wall structural component, fatty acid biosynthesis, protein metabolism, carbohydrate metabolism, biological process, and metabolic process. Reactive oxygen species (ROS) was triggered in maize at the early stage of infection. The DEGs were enriched in response to ROS, hydrogen peroxide, chitinase activity, monooxygenase activity, lignin metabolism. At the later stage of infection, F. verticillioides colonized and expanded in maize, and the DEGs were enriched in carbohydrate and cell wall polysaccharide catabolic process, transmembrane transport and oxidoreductase activity. Maize responded to pathogen infection through phenylpropanoid, lignin, flavonoid biosynthesis, MAPK signaling pathway, plant-pathogen interaction and plant hormone signal transduction. Six DEGs of maize and six DEGs of F. verticillioides were randomly selected for qRT-PCR. The results were consistent with those of transcriptome sequencing, which confirmed the accuracy of RNA-seq. 【Conclusion】 At the early stage of infection, F. verticillioides grew in the intercellular space, triggering ROS outbreak in maize and the expression of related pathway differential genes. At the middle and late stages of infection, the pathogen further colonized and expanded in maize with starch as nutrient. Maize responded to the infection of F. verticillioides through biosynthesis of phenylpropanoid, lignin and chitinase. Meanwhile, plant-pathogen interaction, MAPK signaling pathway, and plant hormone signal transduction were involved in the resistance to the infection of F. verticillioides.